PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT05113
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 58aa    MW: 6746.68 Da    PI: 5.776
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT05113genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.48.7e-17453149
       NAM  1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk 49
              lppG+rF Pt+eelv +yL++k++g++  ++e+vi+ vd+++++Pw+Lp 
  EMT05113  4 LPPGYRFYPTEEELVRFYLRHKLDGSRrADIERVIPVVDVCSLDPWQLPG 53
              79**********************9997888889**************93 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-17355IPR003441NAC domain
PROSITE profilePS5100519.632458IPR003441NAC domain
PfamPF023652.2E-7549IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 58 aa     Download sequence    Send to blast
MGELPPGYRF YPTEEELVRF YLRHKLDGSR RADIERVIPV VDVCSLDPWQ LPGTQGRS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3599549e-61AK359954.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1107F05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003568356.14e-27PREDICTED: NAC domain-containing protein 90-like isoform X1
RefseqXP_014754362.13e-27PREDICTED: NAC domain-containing protein 90-like isoform X2
SwissprotQ9FMR37e-14NAC90_ARATH; NAC domain-containing protein 90
TrEMBLM8BEC81e-36M8BEC8_AEGTA; Uncharacterized protein
STRINGMLOC_7757.15e-27(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2914433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.14e-15NAC domain containing protein 90